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1.
Proc Natl Acad Sci U S A ; 121(18): e2309733121, 2024 Apr 30.
Article En | MEDLINE | ID: mdl-38662546

Animals moving together in groups are believed to interact among each other with effective social forces, such as attraction, repulsion, and alignment. Such forces can be inferred using "force maps," i.e., by analyzing the dependency of the acceleration of a focal individual on relevant variables. Here, we introduce a force map technique suitable for the analysis of the alignment forces experienced by individuals. After validating it using an agent-based model, we apply the force map to experimental data of schooling fish. We observe signatures of an effective alignment force with faster neighbors and an unexpected antialignment with slower neighbors. Instead of an explicit antialignment behavior, we suggest that the observed pattern is the result of a selective attention mechanism, where fish pay less attention to slower neighbors. This mechanism implies the existence of temporal leadership interactions based on relative speeds between neighbors. We present support for this hypothesis both from agent-based modeling as well as from exploring leader-follower relationships in the experimental data.


Social Behavior , Animals , Behavior, Animal/physiology , Leadership , Fishes/physiology , Models, Biological , Social Interaction , Swimming
2.
Sci Rep ; 12(1): 10783, 2022 06 24.
Article En | MEDLINE | ID: mdl-35750698

Behavioral contagion and the presence of behavioral cascades are natural features in groups of animals showing collective motion, such as schooling fish or grazing herbivores. Here we study empirical behavioral cascades observed in fish schools defined as avalanches of consecutive large changes in the heading direction of the trajectory of fish. In terms of a minimum turning angle introduced to define a large change, avalanches are characterized by distributions of size and duration showing scale-free signatures, reminiscent of self-organized critical behavior. We observe that avalanches are generally triggered by a small number of fish, which act as effective leaders that induce large rearrangements of the group's trajectory. This observation motivates the proposal of a simple model, based in the classical Vicsek model of collective motion, in which a given individual acts as a leader subject to random heading reorientations. The model reproduces qualitatively the empirical avalanche behavior observed in real schools, and hints towards a connection between effective leadership, long range interactions and avalanche behavior in collective movement.


Social Behavior , Swimming , Animals , Behavior, Animal , Fishes , Leadership , Models, Biological
3.
Phys Rev E ; 100(4-1): 042305, 2019 Oct.
Article En | MEDLINE | ID: mdl-31770903

We investigate the effects of long-range social interactions in flocking dynamics by studying the dynamics of a scalar model of collective motion embedded in a complex network representing a pattern of social interactions, as observed in several social species. In this scalar model we find a phenomenology analogous to that observed in the classic Vicsek model: In networks with low heterogeneity, a phase transition separates an ordered from a disordered phase. At high levels of heterogeneity, instead, the transition is suppressed, and the system is always ordered. This observation is backed up analytically by the solution of a modified scalar model within an heterogeneous mean-field approximation. Our work extends the understanding of the effects of social interactions in flocking dynamics and opens the path to the analytical study of more complex topologies of social ties.

4.
ACS Nano ; 13(7): 7842-7849, 2019 07 23.
Article En | MEDLINE | ID: mdl-31241887

Viruses undergo mesoscopic morphological changes as they interact with host interfaces and in response to chemical cues. The dynamics of these changes, over the entire temporal range relevant to virus processes, are unclear. Here, we report on creep compliance experiments on a small icosahedral virus under uniaxial constant stress. We find that even at small stresses, well below the yielding point and generally thought to induce a Hookean response, strain continues to develop in time via sparse, randomly distributed, relatively rapid plastic events. The intermittent character of mechanical compliance only appears above a loading threshold, similar to situations encountered in granular flows and the plastic deformation of crystalline solids. The threshold load is much smaller for the empty capsids of the brome mosaic virus than for the wild-type virions. The difference highlights the involvement of RNA in stabilizing the assembly interface. Numerical simulations of spherical crystal deformation suggest intermittency is mediated by lattice defect dynamics and identify the type of compression-induced defect that nucleates the transition to plasticity.


Bromovirus/chemistry , Capsid/chemistry , Elasticity , Microscopy, Atomic Force , RNA, Viral/chemistry
5.
Phys Rev Lett ; 120(6): 068303, 2018 Feb 09.
Article En | MEDLINE | ID: mdl-29481262

Social relationships characterize the interactions that occur within social species and may have an important impact on collective animal motion. Here, we consider a variation of the standard Vicsek model for collective motion in which interactions are mediated by an empirically motivated scale-free topology that represents a heterogeneous pattern of social contacts. We observe that the degree of order of the model is strongly affected by network heterogeneity: more heterogeneous networks show a more resilient ordered state, while less heterogeneity leads to a more fragile ordered state that can be destroyed by sufficient external noise. Our results challenge the previously accepted equivalence between the static Vicsek model and the equilibrium XY model on the network of connections, and point towards a possible equivalence with models exhibiting a different symmetry.


Models, Biological , Social Behavior , Animals , Population Dynamics
6.
Proc Natl Acad Sci U S A ; 112(47): 14545-50, 2015 Nov 24.
Article En | MEDLINE | ID: mdl-26553975

Designing and controlling particle self-assembly into robust and reliable high-performance smart materials often involves crystalline ordering in curved spaces. Examples include carbon allotropes like graphene, synthetic materials such as colloidosomes, or biological systems like lipid membranes, solid domains on vesicles, or viral capsids. Despite the relevance of these structures, the irreversible deformation and failure of curved crystals is still mostly unexplored. Here, we report simulation results of the mechanical deformation of colloidal crystalline shells that illustrate the subtle role played by geometrically necessary topological defects in controlling plastic yielding and failure. We observe plastic deformation attributable to the migration and reorientation of grain boundary scars, a collective process assisted by the intermittent proliferation of disclination pairs or abrupt structural failure induced by crack nucleating at defects. Our results provide general guiding principles to optimize the structural and mechanical stability of curved colloidal crystals.

7.
Phys Rev Lett ; 106(24): 245501, 2011 Jun 17.
Article En | MEDLINE | ID: mdl-21770579

We consider the laminar flow of a vortex crystal in the Corbino disk geometry. Laminar flow can be induced by thermal fluctuations melting the crystal, but also by shear stress after applying a large current at zero temperature. While the velocity profile is the same in the two cases, the underlying vortex structure is completely different. A vortex crystal in this geometry can flow in a laminar fashion whenever the appropriate curvature is established in the vortex lattice. This curvature requires the presence of geometrically necessary disclinations, which here migrate from the boundary to the bulk of the crystal in the form of current-induced grain boundary scars in flat geometry. We provide an estimate of the characteristic current needed to initiate such a laminar flow regime in the vortex crystal and show that the result is in good agreement with simulations.

8.
PLoS One ; 6(6): e20418, 2011.
Article En | MEDLINE | ID: mdl-21666747

Nanoindentation techniques recently developed to measure the mechanical response of crystals under external loading conditions reveal new phenomena upon decreasing sample size below the microscale. At small length scales, material resistance to irreversible deformation depends on sample morphology. Here we study the mechanisms of yield and plastic flow in inherently small crystals under uniaxial compression. Discrete structural rearrangements emerge as a series of abrupt discontinuities in stress-strain curves. We obtain the theoretical dependence of the yield stress on system size and geometry and elucidate the statistical properties of plastic deformation at such scales. Our results show that the absence of dislocation storage leads to crucial effects on the statistics of plastic events, ultimately affecting the universal scaling behavior observed at larger scales.


Particle Size , Stress, Mechanical , Elasticity , Nanoparticles/chemistry , Surface Properties , Thermodynamics
9.
Phys Rev Lett ; 105(1): 015501, 2010 Jul 02.
Article En | MEDLINE | ID: mdl-20867459

Dislocation assemblies exhibit a jamming or yielding transition at a critical external shear stress value σ=σ{c}. Here we study the heterogeneous and collective nature of dislocation dynamics within a crystal plasticity model close to σ{c}, by considering the first-passage properties of the dislocation dynamics. As the transition is approached in the moving phase, the first-passage time distribution exhibits scaling, and a related peak dynamical susceptibility χ{4}{*} diverges as χ{4}{*}∼(σ-σ{c}){-α}, with α≈1.1. We relate this scaling to an avalanche description of the dynamics. While the static structural correlations are found to be independent of the external stress, we identify a diverging dynamical correlation length ξ{y} in the direction perpendicular to the dislocation glide motion.

10.
Science ; 312(5777): 1151-2, 2006 May 26.
Article En | MEDLINE | ID: mdl-16739254
11.
Science ; 312(5777): 1149-50, 2006 May 26.
Article En | MEDLINE | ID: mdl-16728623
12.
Phys Rev Lett ; 92(25 Pt 1): 257004, 2004 Jun 25.
Article En | MEDLINE | ID: mdl-15245052

We discuss the formation of a vortex polycrystal in type II superconductors from the competition between pinning and elastic forces. We compute the elastic energy of a deformed grain boundary, which is strongly nonlocal, and obtain the depinning stress for weak and strong pinning. Our estimates for the grain size dependence on the magnetic field strength are in good agreement with previous experiments on NbMo. Finally, we discuss the effect of thermal noise on grain growth.

13.
Nat Mater ; 2(7): 477-81, 2003 Jul.
Article En | MEDLINE | ID: mdl-12819772

A new class of artificial atoms, such as synthetic nanocrystals or vortices in superconductors, naturally self-assemble into ordered arrays. This property makes them applicable to the design of novel solids, and devices whose properties often depend on the response of such assemblies to the action of external forces. Here we study the transport properties of a vortex array in the Corbino disk geometry by numerical simulations. In response to an injected current in the superconductor, the global resistance associated to vortex motion exhibits sharp jumps at two threshold current values. The first corresponds to a tearing transition from rigid rotation to plastic flow, due to the reiterative nucleation around the disk centre of neutral dislocation pairs that unbind and glide across the entire disk. After the second jump, we observe a smoother plastic phase proceeding from the coherent glide of a larger number of dislocations arranged into radial grain boundaries.


Electric Conductivity , Manufactured Materials
14.
Phys Rev Lett ; 89(16): 165501, 2002 Oct 14.
Article En | MEDLINE | ID: mdl-12398733

We simulate the glide motion of an assembly of interacting dislocations under the action of an external shear stress and show that the associated plastic creep relaxation follows Andrade's law. Our results indicate that Andrade creep in plastically deforming crystals involves the correlated motion of dislocation structures near a dynamic transition separating a flowing from a jammed phase. Simulations in the presence of dislocation multiplication and noise confirm the robustness of this finding and highlight the importance of metastable structure formation for the relaxation process.

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